Skip to main content

Table 1 Statistics of the number of a changes and rates of change in the corresponding proteins at different passages of the 17GXCZ-1ORF3d and 17GXCZ-1ORF3c variants

From: Genetic characteristics associated with the virulence of porcine epidemic diarrhea virus (PEDV) with a naturally occurring truncated ORF3 gene

ORFs

17GXCZ-1ORF3d

17GXCZ-1ORF3c

Size (aa)

P30

P60

P90

P120

Size (aa)

P30

P60

P90

P120

S

1386

3 (0.22)

5 (0.36)

8 (0.58)

7 (0.51)

1386

2 (0.14)

7 (0.51)

12 (0.87)

9 (0.65)

ORF3

89

0 (0)

0 (0)

0 (0)

0 (0)

225

1 (0.44)

3 (1.33)

2 (0.89)

3 (1.33)

E

77

2 (2.6)

0 (0)

0 (0)

0 (0)

77

0 (0)

0 (0)

2 (2.60)

2 (2.60)

M

227

2 (0.88)

1 (0.44)

1 (0.44)

3 (1.32)

227

0 (0)

0 (0)

1 (0.44)

1 (0.44)

N

442

0 (0)

2 (0.45)

2 (0.45)

3 (0.68)

442

2 (0.45)

2 (0.45)

3 (0.68)

3 (0.68)

Total

 

7

8

11

13

 

5

12

20

18

  1. The number of aa changes and change rates of the corresponding proteins (%) are indicated in parentheses. Amino acid position numbering is based on the sequences of the 17GXCZ-1ORF3d-P15 and 17GXCZ-1ORF3c-P15 strains.