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Table 1 Primers used for construction of the PRRSV MLV strain rGD or chimeric PRRSV rGD-SX-5U2 infectious clones

From: A chimeric strain of porcine reproductive and respiratory syndrome virus 2 derived from HP-PRRSV and NADC30-like PRRSV confers cross-protection against both strains

Primer

Sequence

Product size(bp)

F1-F

AGTGAACCGTGGCCCGGGCGGCCATGACGTATAGGTGTTGGCTCT

1937

F1-R

ACTGCCGGACATTTCCGCCAGGGCTGCCGGGATGACACTACTAGGC

F2-F

TCCCGGCAGCCCTGGCGGAAATGTCCGGCAGTTTTGGTTGTTCAACACCT

3954

F2-R

CTTCCAGTTCGGGTTTGGCAGCAAGCAGGGCACAA

F3-F

AACCCGAACTGGAAGGAGGCCTTTCCACAGTTCAACT

5400

F3-R

CGGCCTTCAAGTTGAAAATAGGCCGTCTTGTCTTTCCATAC

F4-F

ATTTTCAACTTGAAGGCCGCCATTTTACCTGGTATCAACTTGCAAG

3889

F4-R

CGGATGCCCAGGTCGGACCGCGAGGAGGTGGAGATGCCATGCCGACCCTTTTTTTTTTTTTTTTTTTTTTTTTAATTTCGGCCGCATGGTTCTCGCCAATT

Fragement A-F

GGCAATTTGAATGTTCAAGTATGTTGGGGAAATGCTTGACCG

1516

Fragement A-R

GATGTCTCAAGAATGTCAGCCCATCATGCTGAAGGTGGCGTTGTG

Fragement B-F

CTGACTAAGGAGCAGTGTTTAAACTGCTAGCCGCCAGCGG

6113

Fragement B-R

TGAACATTCAAATTGCCAGTAGGATGGCAAAAAGACAGGCTAAA

Fragement C-F

GCTGACATTCTTGAGACATCCTGGTGTTTGAATTGGAAGAATGC

218

Fragement C-R

ATGCCCAGGTCGGACCGCGAGGAGGTGGAGAT

Fragement E-F

CATAAGTGGTACGGTGCTGGGAAGAGAGCAAGAAGAGCA

3222

Fragement E-R

GAGGTGTGGGCCTCCTCCTGAAGACTTGGAGATCTGCCT

Fragement F-F

ACCGTGGCCCGGGCGGCCATGACGTATAGGTGTTGGCTCT

1361

Fragement F-R

CCAGCACCGTACCACTTATGACTGCCAAACCG

Fragement G-F

TTCAGGAGGAGGCCCACACCTCATTGCTGCC

2779

Fragement G-R

GTTTAAACACTGCTCCTTAGTCAGGCCTTGGAGTTTGTC

  1. Homologous arm sequences in italics and restriction site sequences in underscores.