Table 2 Homology of the nucleotide and deduced amino acid sequences of the full SADS-CoV S protein of the Vietnam isolates and the reference strains
From: Molecular characterization of swine acute diarrhea syndrome coronavirus detected in Vietnamese pigs
Strain | Vietnam/VNUA-BN01/2019 | Vietnam/VNUA-TN02/2023 | Vietnam/VNUA-TN03/2023 | |||
|---|---|---|---|---|---|---|
Nucleotide (%) | Amino acid (%) | Nucleotide (%) | Amino acid (%) | Nucleotide (%) | Amino acid (%) | |
Vietnam/VNUA-BN01/2019 | – |  |  | |||
Vietnam/VNUA-TN02/2023 | 100 | 100 | – |  | ||
Vietnam/VNUA-TN03/2023 | 100 | 100 | 100 | 100 | – | |
CN/GDWT/2017 | 100 | 100 | 100 | 100 | 100 | 100 |
PEAV/CN/GD-01–2017 | 99.9 | 99.9 | 99.9 | 99.9 | 99.9 | 99.9 |
SeACoV/CH/GD-01/2017 | 99.5 | 99.2 | 99.5 | 99.2 | 99.5 | 99.2 |
CH/FJWT/2018 | 97.3 | 98.4 | 97.3 | 98.4 | 97.3 | 98.4 |
CN/GDLX/2019 | 99.8 | 99.6 | 99.8 | 99.6 | 99.8 | 99.6 |
Guanxi/2021 | 99.0 | 98.2 | 99.0 | 98.2 | 99.0 | 98.2 |