Skip to main content

Table 1 Primers used for plasmid construction

From: BEV 2C protein inhibits the NF-κB signalling pathway to promote viral replication by targeting IKBKB and p65

Gene name

Forward primer sequence (5ʹ–3ʹ)

Reverse primer sequence (5ʹ–3ʹ)

 

HY12-2C

HY12-VP1

HY12-VP2

HY12-VP3

HY12-VP4

HY12-2A

HY12-2B

HY12-3AB

HY12-3C

HY12-3D

2C (aa 1–125)

2C (aa 126–253)

CCGGAATTCTCAGACAATTGGAT

CCGGAATTCAATGACCCAGGGAA

CCGGAATTCTCTCCGTCAGCAGAA

CCGGAATTCGGCCTTCCAACAAA

CCGGAATTCATGGGCGGTCAGTT

CCGGAATTCGGGCCTTTTGGACA

CCGGAATTCGGCATTACTGATTAT

CCGGAATTCGGCCCCGTAACCTA

CCCTCGAGGGACCACTCTTTGA

CCGGAATTCGGGCAAATAGAATAC

GCGTCGACTCAGACAATTGGATAA

GCGTCGACCTCATACATGGCTCTCC

ATTTGCGGCCGCTTATTGAAAAAGG

ATTTGCGGCCGCGTACGAGGTGAG

ATTTGCGGCCGCTTGGTTTGATGCAA

ATTTGCGGCCGCCTGTAGTGCGGCTG

ATTTGCGGCCGCTTTCAGCGGAACG

ATTTGCGGCCGCTTGCTCCATAGCGT

ATTTGCGGCCGCTTGCCTCTCTGCCA

ATTTGCGGCCGCTTGAGTTTGAACCT

ATTTGCGGCCGCTTGTTCAACAGTAA

ATTTGCGGCCGCTTAGAAAGAATCT

CGGGATCCTTATGCACATACGGGTTC

CGGGATCCTTATGTCTTTCTGTACT

 

2C (aa 254–329)

2C (aa 1–121)

2C (aa 1–117)

2C (aa 1–113)

p65

p65 (aa 1–290)

p65 (aa 291–551)

p65 (aa 1–194)

p65 (aa 195–290)

IKBKB

GCGTCGACTATAAGAAGAATGGAT

GCGTCGACTCAGACAATTGGATAA

GCGTCGACTCAGACAATTGGATAA

GCGTCGACTCAGACAATTGGATAA

CGCGGATCCATGGACGAACTGTTCC

CGCGGATCCATGGACGAACTGTTCC

CGGGATCCATGGATACAGACGATC

CGCGGATCCATGGACGAACTGTTCC

CGCGGATCCATAAGATCTGCCGAG

CCAAGCTTATGAGAAGGCTGACCC

CGGGATCCTTATTGAAAAAGAGCCTC

CGGGATCCTTATTCAATGCGATTC

CGGGATCCTTACTTGGTCTTGAACTG

CGGGATCCTTACTGCATGGCACCGAG

TGCTCTAGAGGAGCTGATCTGACT

TGCTCTAGATGGCAGGTACTGGAATT

TGCTCTAGAGCTGATCTGACTCAGC

TGCTCTAGAGAGCTCGGCAGTGTT

TGCTCTAGATGGCAGGTACTGGAATT

GCTCTAGATGAGGCCTGCTCCAGG

 
  1. The restriction enzyme cutting sites are highlighted in bold.